polyactis/accucopy repository overview

A Ubuntu 18.04 image for Accucopy. https://www.yfish.org/display/PUB/Accucopy⁠

Accucopy is installed in /usr/local/Accucopy/. /usr/local/bin contains precompiled samtools. Strelka, used for variant calling, is installed in /usr/local/.

The reference genome folder (available from https://www.yfish.org/display/PUB/Accucopy⁠) is NOT included in the docker image.