poquirion/sct repository overview

FROM ubuntu:16.04
MAINTAINER P-O Quirion <[email protected]>

# Install dependencies available through apt-get
RUN apt-get update && apt-get install -y \
  git \
  wget \
  bzip2

RUN cd /opt && git clone --depth 1  https://github.com/neuropoly/spinalcordtoolbox.git

RUN cd /opt/spinalcordtoolbox && yes | ./install_sct 
RUN echo export PATH=${PATH}:/opt/spinalcordtoolbox/bin >>  /etc/bash.bashrc

RUN DEBIAN_FRONTEND=noninteractive apt-get install -y  openssh-server xorg