resolwebio/common repository overview

⁠Docker image for common bioinformatics utilities

It is based on ubuntu-18.04 version of docker.io/resolwebio/base⁠ image.

⁠Included tools:

• bedGraphToBigWig (kent-v365)
• bedToBigBed (kent-v365)
• Bedtools (2.29.2)
• Bowtie (v1.2.2)
• Bowtie2 (v2.3.4.1)
• BWA (v0.7.17-r1188)
• Picard (2.8.1+dfsg-3)
• deepTools (3.1.0)
• FastQC (v0.11.8)
• HISAT2 (2.1.0)
• HTSeq (0.9.1)
• MultiQC (1.8.0b)
• QoRTs (1.3.0)
• Rsamtools (2.0.0)
• Samtools (1.10)
• Seqtk (1.2-r94)
• SRA Toolkit (v2.10.0)
• Subread (1.6.3)
• Tabix (1.7-2)
• WALT (1.01)