romanhaa/cerebro repository overview

Available images:

• Full version: Contains the Cerebro app, as well as R packages for analysis (Seurat, Monocle and dependencies).
• Light version: Contains only the Cerebro app, no R packages for analysis (Seurat, Monocle and dependencies).
• Latest: Most recent light version.

How to use:

docker run -p <port_of_choice>:8080 -v <export_folder>:/plots romanhaa/cerebro
# OR
docker run -p <port_of_choice>:<port_of_choice> -v <export_folder>:/plots romanhaa/cerebro Rscript -e 'shiny::runApp(cerebroApp::launchCerebro(), port=<port_of_choice>, host="0.0.0.0", launch.browser=FALSE)'

Further information:

• Website of cerebroApp: https://romanhaa.github.io/cerebroApp/⁠
• GitHub repository of Cerebro: https://github.com/romanhaa/Cerebro⁠