rsettlag/ivar repository overview

⁠iVAR_Pangolin_pipeline

Pipeline based off the workflow given by monroe PE workflow.
https://github.com/StaPH-B/staphb_toolkit/tree/master/staphb_toolkit/workflows/monroe⁠

Adding a bit more QC and checks, consolidating the containers to save space, moving out of NextFlow (until I have time to figure that out).

Evolving ... like a virus ...