sacdallago/cellmap repository overview

⁠CellMap

Protein Localization and Protein-Protein Interaction (PPI) visualization tool.

⁠Live example:

cellmap.protein.properties⁠

⁠Prerequisites:

To install locally, you must have an instance of MongoDB running and data for proteins formatted in the correct way (see data folder).

⁠Fill up database

You can fill the database with the publicly available data by running npm run build:database. This command will load the data from data/data.json.

⁠Cite

Dallago C, Goldberg T, Andrade-Navarro MA et al. CellMap visualizes protein-protein interactions and subcellular localization [version 2; peer review: 2 approved].
F1000Research 2018, 6:1824 (https://doi.org/10.12688/f1000research.12707.2)

Link to the manuscript: https://doi.org/10.12688/f1000research.12707.2⁠