Variant calling with Strelka, Varscan, MuTect2, plus snakemake
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This docker image started from the GATK nightly build and adds: Snakemake, Varscan, Strelka, VEP, pVACseq, and Snakemake.
For more detailed descriptions, see Seema Plaisier's Github repository, Dockerfiles/variant_calling: https://github.com/sbplaisier/Dockerfiles.git
Content type
Image
Digest
sha256:97bd6d9d6…
Size
5.1 GB
Last updated
about 4 years ago
docker pull sbplaisier/variant_calling:1.7