shl198/lsgkm repository overview

FROM ubuntu:18.04

MAINTAINER ShangzhongLi [email protected]⁠

ENV PATH /opt/miniconda/bin:$PATH ENV LANG=C.UTF-8 LC_ALL=C.UTF-8

⁠install conda

SHELL ["/bin/bash", "-c"] RUN apt-get update && apt-get install -y wget libpng-dev libssl-dev
gcc make libssl1.0.0 git g++ &&
cd opt &&
git clone https://github.com/Dongwon-Lee/lsgkm.git⁠ &&
cd lsgkm/src &&
make &&
make install &&
cp gkmtrain /bin &&
cp gkmpredict /bin

CMD ["/bin/bash"]