sysbiocurie/upmaboss repository overview

⁠UPMaBoSS-docker

Docker image to simulate UPMaBoSS models

⁠Use with binder

⁠Use with docker

To run this notebook using the built docker image, run:

docker run -p 8888:8888 -d sysbiocurie/upmaboss

Notebooks are available in a web browser at localhost:8888, in UPMaBoSS.

⁠Use with conda

Clone this repository:

git clone https://github.com/sysbio-curie/UPMaBoSS-docker

To build the conda environment:

conda create -n umb -c colomoto -c potassco pymaboss ginsim-python notebook seaborn

To activate it :

conda activate umb

To run the notebook:

jupyter notebook

Notebooks are available in a web browser at localhost:8888.