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thsanchez/fetpype_utils

By thsanchez

Updated about 1 year ago

Utilities for preprocessing fetal brain MRI data.

Image
Machine learning & AI
Data science
1

394

thsanchez/fetpype_utils repository overview

Utility container for the fetpype project.

The repository containing the source code is available on GitHub. It contains the following scripts:

  • run_brain_extraction: Brain extraction using MONAIfbs (the code was updated to work with more recent MONAI versions) and fet-bet.
  • run_denoising: Image denoising using ANTS' DenoiseImage.
  • run_bias_field_correction: Bias field correction using ANTS' implementation of the N4 algorithm.

Tag summary

Content type

Image

Digest

sha256:c8be433c9

Size

4.5 GB

Last updated

about 1 year ago

docker pull thsanchez/fetpype_utils