Simulation tool for diffusion MRI, available at http://camino.cs.ucl.ac.uk/
875
Usage example:
docker run -v $PWD:/data -w /data tsantini/camino datasynth -schemefile scheme_example.scheme -plyfile ply_example.ply -walkers 100000 -seed $RANDOM -p 0 -diffusivity 3E-9 -tmax 2000 -voxelsizefrac 1 -substrate ply -initial uniform -voxels 1 1>out.bfloat 2>out.stats
Examples of waveforms and geometry files as well as the Dockerfile for this conteiner can be found at https://github.com/tsantini/microstructural_changes_invivo_exvivo
Content type
Image
Digest
Size
517.7 MB
Last updated
over 4 years ago
docker pull tsantini/camino