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tsantini/freesurfer

By tsantini

•Updated 6 months ago

Image
0

395

tsantini/freesurfer repository overview

⁠Example 1: running a test subject in the current folder (modify "YOUR_LICENSE_PATH" and "test.nii.gz")

docker run --rm \
  -e SUBJECTS_DIR=/data \
  -v "$PWD":/data \
  -v "YOUR_LICENSE_PATH/license.txt":/usr/local/freesurfer/license.txt:ro \
  -w /data \
  tsantini/freesurfer:8.1.0 \
  recon-all -i /data/test.nii.gz -s test -all

Tag summary

Content type

Image

Digest

sha256:e284cd32a…

Size

22.2 GB

Last updated

8 months ago

docker pull tsantini/freesurfer:8.1.0