ttubb/submg repository overview

⁠subMG

subMG is hosted on GitHub. Please consult the GitHub repository at ttubb/submg⁠ for more information.

⁠About

subMG aids in the submission of metagenomic study data to the European Nucleotide Archive. It can be used to submit various combinations of samples, reads, (co-)assemblies, bins and MAGs. After you enter your (meta)data in a configuration form, submg derives additional information where required, creates samplesheets and manifests and uploads everything to your ENA account. You can use a combination of manual and submg steps to submit your data (e.g. submitting samples and reads through the ENA web interface, then using the tool to submit the assembly and bins).