uomsystemsbiology/barzel2013network repository overview

⁠Overview

This is the reference environment for the manuscript 'Network link prediction by global silencing of indirect correlations'⁠. It executes code to reproduce specific results described in the manuscript. You can find more information about this research at the GitHub repository for the code⁠.

To find other versions of this reference environment, see Other Links below. To learn more about reference environments, see the detailed description here⁠.

⁠Instructions for use

This version of the reference environment is a Docker container. To use it, install Docker⁠, then do:

$ sudo docker pull uomsystemsbiology/barzel2013network
$ sudo docker run uomsystemsbiology/barzel2013network /sbin/my_init -- ./run_experiments_supplementarysoftware2.sh
$ sudo docker run uomsystemsbiology/barzel2013network /sbin/my_init -- ./run_experiments_supplementarysoftware3.sh

This will start the container and execute the scripts which reproduce the results described in the manuscript.

⁠Other links

Manuscript link⁠

Project page link⁠

Vagrant-managed virtual machine⁠

Bootable ISO⁠