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uvarc/qiime2

By uvarc

•Updated about 4 years ago

QIIME2. Same functionality as the official image but less than half the size.

Image
0

1.1K

uvarc/qiime2 repository overview

⁠QIIME 2

https://qiime2.org⁠

⁠Contents

Contents\QIIME 22022.22020.82020.6
Python packages3.8⁠3.6⁠3.6⁠
Empress⁠YYN
PICRUSt2⁠YYN

⁠Usage on Rivanna

Pick the most convenient option for your workflow.

⁠Command line

Follow the instructions displayed upon loading the module.

⁠Python
singularity exec $CONTAINERDIR/qiime2-x.y.sif python <script.py>

If you need other Python packages:

singularity exec $CONTAINERDIR/qiime2-x.y.sif python -m pip install --user <package>

Tag summary

Content type

Image

Digest

sha256:fc9cd107f…

Size

1.2 GB

Last updated

about 4 years ago

docker pull uvarc/qiime2:2022.2