vera/albacore repository overview

⁠albacore

Dockerfile for the Albacore basecaller from Oxford Nanopore

⁠usage

cd into the directory containing the reads directory

docker run -v $PWD:$PWD -w $PWD -u $UID \
vera/albacore \
--recursive \
-t $(nproc) \
-i reads \
-c /opt/albacore/r94_450bps_linear.cfg \
-s output \

⁠Available flowcell + kit combinations are: