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vibpsb/interproscan

Sponsored OSS

By VIB - Plant System Biology

•Updated over 5 years ago

Docker container to run the EMBL-EBI software InterProScan (version 5.48-83.0)

Image
Machine learning & AI
Data science
0

3.5K

vibpsb/interproscan repository overview

⁠Interproscan

InterPro is a database which integrates together predictive information about proteins' function from a number of partner resources, giving an overview of the families that a protein belongs to and the domains and sites it contains.

This is used to run Interproscan optimized to work well together with PLAZA.

⁠Usage

Executing interproscan command using the Docker container the syntax is:

docker run --rm  vibpsb/interproscan

Tag summary

Content type

Image

Digest

Size

31.5 GB

Last updated

over 5 years ago

docker pull vibpsb/interproscan:5.48-83.0

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