vidjil/server repository overview

Vidjil (http://www.vidjil.org⁠) is an open-source platform for the analysis of high-throughput sequencing data from lymphocytes, developed by the Bonsai bioinformatics lab and the VidjilNet consortium.

V(D)J recombinations in lymphocytes are essential for immunological diversity. They are also useful markers of pathologies, and in leukemia, are used to quantify the minimal residual disease during patient follow-up. High-throughput sequencing (NGS/HTS) now enables the deep sequencing of a lymphoid population with dedicated Rep-Seq methods and software.

Vidjil is used in routine clinical practice in hospitals around the world, in particular for the diagnosis of patients suffering Acute Lymphoblastic Leukemia (ALL). More than 2,500 samples of ALL patients were analyzed with Vidjil since 2015. Vidjil is also used in several studies on other hemopathies (ALL, CLL, WM, lymphomas) as well as on immunology topics involving T-cell or B-cell repertoires.

This is the main image for a local installation of the Vidjil server. Documentation: http://www.vidjil.org/doc/server/⁠