virtualcell/vcell-solvers repository overview

⁠vcell-solvers

Virtual Cell solvers virtualcell/vcell-solvers⁠ is a collection of numerical simulation codes used in the Virtual Cell framework virtualcell/vcell⁠).

⁠The Virtual Cell Project

The Virtual Cell is a modeling and simulation framework for computational biology. For details see http://vcell.org⁠ and http://github.com/virtualcell⁠.

⁠Building VCell Solvers

⁠Using VirtualBox and Vagrant

• git clone https://github.com/virtualcell/vcell.git⁠
• cd vcell/VagrantBoxes

⁠Building for Linux (64 bit)

details⁠

$ cd linux64
$ vagrant up
$ vagrant ssh -c /vagrant_numerics/build.sh
$ vagrant halt

⁠Building for Linux (32 bit)

details⁠

$ cd linux32
$ vagrant up
$ vagrant ssh -c /vagrant_numerics/build.sh
$ vagrant halt

⁠Building for Macos on a Mac Apple only allows a Mac VM to run on Apple hardware

[details}(VagrantBoxes/mac64/README.md)

$ cd mac64
$ vagrant up
$ vagrant ssh -c /vagrant/build.sh
$ vagrant halt

⁠Building for Windows (64 bit) on Windows

details: including building on other platforms⁠

$ cd win64
$ vagrant up
$ vagrant powershell -c \vagrant\build.sh
$ vagrant halt