biowardrobe2

Dockerized version of DESeq/DESeq2 script from BioWardrobe

Complete analysis of Cut&Run experiments, using SEACR 1.3 for calling peaks.

A docker image for processing cut-and-run data with macs2 peak calling.

DESeq - 1.22.1 DESeq2 - 1.10.1

Differential Binding Analysis of ChIP-Seq Peak Data

GSEAPY: Gene Set Enrichment Analysis in Python

An automated cross-platform workflow for RNA-Seq gene, splicing and pathway analysis

Dockerized version of Seurat script

The UCSC Cell Browser is a fast, lightweight viewer for single-cell data