cimendes

De novo assembler based on overlap-layout-consensus to assemble at strain resolution.

raven-assembler for long read data

shasta assembler for long read data

Example for canu assembler

ra assembler

Flye de novo assembler for single molecule sequencing reads

MetaHipMer 2 assembler

docker container for the unicycler assembler

Assemble large genomes using short reads

docker container for skesa

docker container for the minia assembler

Spades docker container

Docker container for minimap2

Base image for LMAS (Last metagenomic assembler standing) workflow

this is a test

extension of ummidock/bowtie2_samtools with bowtie2 hg19 index

wtdbg2 assembler for long read data

this is demo

Kraken container with minikraken DB

test

Docker image for card's rgi (with version on the tag)

Docker container for the gatb-minia-pipeline assembler

bcalm assembler

docker container for megahit metagenomic assembler

docker container for the pandaseq assembler

Docker container for the IDBA assembler, including the IDBA-UD metagenomic assembler

docker container for megahit assembler