Computational Plant Science Lab

Plant phenotyping using computer vision and machine learning

Syngenta_PhenoTOOLs

docker for smart repo ml_smart_docker

Compute 3D root traits from 3D bean root model

Plant science workflow automation in the browser.

Compute 3D root traits from 3D root model for field-grown maize roots

Computation of root phenes from 3D point clouds.

3D reconstruction using COLMAP

Pipeline: Traits computation from 3D Sorghum root models

Plant phenotyping using computer vision: Compute geometrical traits and analyze plant surface colors

Machine learning and OpenCV-based color clustering method for object segmentation in a single shot.

Python3 version of the root phenotyping tool Digital Imaging of Root Traits (DIRT)

Trait extraction for storage roots