Cytoscape

Containerized versions of Cytoscape for automation use cases in R and Python

Launch Cytoscape with Jupyter(+py4cytoscape) in Docker

CX conversion

Test image for cy-net-share.

Static graph image generator using graph-tool.

Cytoscape.js API support in JS, Python, and R Jupyter kernels.

The ErLang Submit Agent

Cytoscape Prime

IPython Notebook server to control Cytoscape 3 via cyREST.