Ensembl Project
Displaying 1 to 25 of 36 repositories
ensemblorg/datasets-cli
1.0K
0
Container for the datasets tool from the NCBI Datasets command-line (CLI) tools
Data Science
ensemblorg/guihive
1.2K
0
Graphical interface for the eHive workflow manager
Data Science
Integration & Delivery
Monitoring & Observability
ensemblorg/ensembl-genomio
319
0
Ensembl GenomIO Python library
Data Science
Databases & Storage
ensemblorg/ensembl-vep
10M+
14
VEP (Variant Effect Predictor) predicts the functional effects of genomic variants.
ensemblorg/ensembl-legacy-scripts
94
0
Collection of Perl scripts
Data Science
ensemblorg/red
47
0
Data Science
Databases & Storage
Languages & Frameworks
ensemblorg/ensembl-ols-docker
49
0
ensemblorg/gsc_pipeline
401
0
GSC eHive container image
Data Science
Databases & Storage
Machine Learning & AI
ensemblorg/ncrna-mirna
0
0
ensemblorg/otter-test-suite
515
0
ensemblorg/gene_symbol_classifier
380
0
Transformer model for gene symbol assignment of protein coding gene sequences
Data Science
Machine Learning & AI
ensemblorg/mysql4mirror
988
0
Easy mirroring of our pre version 49 infrastructure, which operated only on MySQL v4
Data Science
Databases & Storage
ensemblorg/ensembl-linuxbrew-docker
0
0
Linuxbrew docker to run test on new and updated formulas
Data Science
Languages & Frameworks
Integration & Delivery
ensemblorg/wiggletools
1.7K
0
ensemblorg/ensembl-hive-docker-swarm
1.5K
0
Docker image for Ensembl Hive to run on a Docker Swarm infrastructure
Data Science
Integration & Delivery
ensemblorg/ensembl-hive
3.0K
1
eHive is a system for running computation pipelines on a distributed computing resources cluster
Data Science
Languages & Frameworks
Integration & Delivery
ensemblorg/perl
440
0
ensemblorg/ensembl-vep-training
494
0
Docker container including ensembl-vep, VEP_plugins, sample data (cache/fasta/plugins)
Data Science
Languages & Frameworks
ensemblorg/ensembl-hive-sge
1.4K
0
Local installation of the eHive workflow manager on top of SGE
Data Science
Machine Learning & AI
ensemblorg/ensembl-hive-htcondor
4.3K
0
Local installation of the eHive workflow manager on top of HTCondor
Data Science
Integration & Delivery
Machine Learning & AI
ensemblorg/genome-search
414
0
ensemblorg/ensembl-hive-pbspro
4.5K
0
Local installation of the eHive workflow manager on top of PBSPro
Data Science
Integration & Delivery