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Faryabi Lab

Community User

University of Pennsylvania

Philadelphia, PA

https://faryabilab.com/⁠

Repositories Starred

Displaying 1 to 13 of 13 repositories

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faryabilab/homer

12m

78

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faryabilab/star

STAR v2.7.10b

12m

434

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faryabilab/juicer

Juicer 3C processing tool by AidenLab https://github.com/aidenlab/juicer

3y

139

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faryabilab/hic2cool

3y

53

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faryabilab/samtools

samtools v1.18

3y

531

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faryabilab/bowtie2

3y

77

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faryabilab/seacr

SEACR v1.3

3y

91

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faryabilab/macs2

MACS2 PyPI v2.2.9.1

3y

215

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faryabilab/bwa

BWA v0.7.17

3y

363

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faryabilab/bedtools

Uses Samtools image as base. BEDtools v2.31.0

3y

463

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faryabilab/subread

Subread v2.0.2

3y

229

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faryabilab/picard

Uses SAMtools image as base. Picard v3.1.0

3y

401

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faryabilab/trim_galore

TrimGalore v0.6.10

3y

932