getwilds

Container image for the use of umi_tools in Fred Hutch OCDO's WILDS

Docker image for geospatial R packages in Fred Hutch OCDO's WILDS

Docker image for VarScan variant caller with SAMtools and bcftools dependencies

Docker image for Bowtie 2 in Fred Hutch OCDO's WILDS

Docker image for Bowtie in Fred Hutch OCDO's WILDS

Docker image for the use of bcftools in Fred Hutch OCDO's WILDS

Docker image for STARLING in Fred Hutch OCDO's WILDS

Docker image for CellBender in Fred Hutch OCDO's WILDS

Container image for the use of STAR in Fred Hutch OCDO's WILDS

Container image for the use of GATK in Fred Hutch OCDO's WILDS

Docker image for the use of bedtools in Fred Hutch OCDO's WILDS

Docker image for the use of bwa in Fred Hutch OCDO's WILDS

Docker image for the use of Samtools in Fred Hutch OCDO's WILDS

Docker image for Ollama in Fred Hutch OCDO's WILDS, with OpenCode for LLM-driven coding workflows

Docker image for GWASLab, a Python toolkit for GWAS summary statistics

Docker image for OHDSI HADES in Fred Hutch OCDO's WILDS

Docker image for GA4GH VRS-Python in Fred Hutch OCDO's WILDS

Docker image for Pairtree in Fred Hutch OCDO's WILDS

Docker image for SingleR single-cell RNA-seq cell type annotation in Fred Hutch OCDO's WILDS

Docker image for scater single-cell RNA-seq QC and visualization in Fred Hutch OCDO's WILDS

Docker image for scran single-cell RNA-seq analysis in Fred Hutch OCDO's WILDS

Docker image for DropletUtils single-cell droplet data utilities in Fred Hutch OCDO's WILDS

Docker image for edgeR differential expression analysis of RNA-seq data in Fred Hutch OCDO's WILDS

Docker image for mosdepth, fast BAM/CRAM depth calculation, in Fred Hutch OCDO's WILDS

Docker image for Seurat single-cell RNA-seq analysis in Fred Hutch OCDO's WILDS

Docker image for Lua (with libraries needed to run Lmod) in Fred Hutch OCDO's WILDS

Docker image for DESeq2 RNA-seq differential expression analysis in FH DaSL's WILDS

Docker image for general-purpose Python utilities in Fred Hutch OCDO's WILDS

Docker image for ESMFold protein structure prediction in Fred Hutch OCDO's WILDS

Docker image for PopV in Fred Hutch OCDO's WILDS