Jeffreyy Chun-Hui Yu

The latest version of minimap2 is v2.28

The version of minimap2 is v2.26. The version of Clair3 is 0.16

qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.

This image includes samtools and sambamba.

samtools v.1.19

dockerized sambamba version 0.6.5

dockerized GATK version 3.7

dockerized sratoolkit.2.8.1-ubuntu64

dockerized bwa version 0.7.15

workshop