Papaemmauil's Lab

🐳 a container with cgpCaveman.

🐳 An Ubuntu 16.04 container with a PCAP-core installation.

🐳 a container with cgpPindel.

🐳 old cgp versions, for leukgen legacy only.

A python 3.6 container with a vafCorrect installation.

A Toil example pipeline created with cookiecutter-toil.

A python 2.7 container with Manta and Strelka installation.

👾Simple utility to register versioned toil container pipelines in a bin directory.

An Ubuntu 16.04 container with a VAGrENT installation.

🐳 a docker container with fastqc.

🐳 a picard container with r-base.

🐳 a linux container with cgpBattenberg.

🐳 a container with cgpvcf.

🐳 a facets container.

🐳 a linux container with STAR

🐳 An Ubuntu 16.04 container with a cgpBigWig installation.