lgallagh

Seurat v5.0.1 build with R v4.3. Includes other packages like celldex, SingleR, GSVA etc.

Kraken2, Bracken, KrakenTools & kraken-biom

Uses Broad oncotator image, but changing root permissions to allow Singularity to access executable

Old version of samtools for DDR panel pipeline

Older version of mSINGS (b8c10cf58cec) for DDR panel pipeline

Older install of CNVkit for DDR panel pipeline