Lieber Institute for Brain Development

Kallisto 0.46.1 + R with Bioconductor packages used by BiocMAP (github.com/LieberInstitute/BiocMAP).

Ubuntu 18.04, regtools, and bed_to_juncs.py for python 3

An image containing Ubuntu16.04 and samtools

An image with Ubuntu 16.04, samtools and bcftools- tags referring to the latter two versions

Ubuntu 16.04 and trimmomatic with the jar (e.g. trimmomatic-0.39.jar) and adapters on the PATH

An image based on Bioconductor's R release 3.10, with these bioinformatics packages pre-installed