MGI

Sponsored OSS

Community Organization

McDonnell Genome Institute

St. Louis, MO

Displaying 1 to 25 of 136 repositories

mgibio/smahtqc

877

0

By McDonnell Genome Institute

Updated 4 days ago
CIG@MGI SMaHT QC container. Contact: ebelter

Pulls:

51

Feb 10 to Feb 16

Pulls:

2

Jan 27 to Feb 2

Pulls:

90

Feb 10 to Feb 16

Pulls:

2

Feb 3 to Feb 9

Pulls:

121

Feb 10 to Feb 16

Pulls:

48

Feb 10 to Feb 16

mgibio/samtools

50K+

2

By McDonnell Genome Institute

Updated 2 months ago
samtools: http://www.htslib.org/
Data Science

Pulls:

7,434

Feb 10 to Feb 16

Pulls:

67

Dec 30, 2024 to Jan 5, 2025

mgibio/picard

787

0

By McDonnell Genome Institute

Updated 2 months ago
Picard docker built for MGI use. <ebelter>
Data Science
Machine Learning & AI

Pulls:

91

Feb 10 to Feb 16

mgibio/rnaseq

100K+

2

By McDonnell Genome Institute

Updated 2 months ago
A fat docker image for running RnaSeq alignment
Data Science
Machine Learning & AI

Pulls:

144

Feb 10 to Feb 16

mgibio/vep_helper-cwl

100K+

0

By McDonnell Genome Institute

Updated 2 months ago
Image with vep and associated helper scripts
Data Science
Machine Learning & AI

Pulls:

217

Feb 10 to Feb 16

Pulls:

57

Jan 20 to Jan 26

Pulls:

14

Feb 10 to Feb 16

Pulls:

20

Feb 10 to Feb 16

Pulls:

40

Feb 10 to Feb 16

Pulls:

3

Feb 10 to Feb 16

mgibio/pangenie

625

0

By McDonnell Genome Institute

Updated 5 months ago
PanGenie - short-read genotyper for pangenome graphs
Data Science

Pulls:

5

Feb 3 to Feb 9

Pulls:

2

Feb 10 to Feb 16

mgibio/seqtools

244

0

By McDonnell Genome Institute

Updated 5 months ago
Docker with handy genome sequence tools. Included: samtools, seqtk. Contact: ebelter
Data Science

Pulls:

13

Feb 10 to Feb 16

Pulls:

21

Feb 10 to Feb 16