nf-core

Community Organization

nf-core

Displaying 1 to 25 of 75 repositories

nfcore/gitpod

10K+

0

By nfcore

Updated 2 days ago
nfcore/tools

10K+

0

By nfcore

Updated 2 days ago
Python package with helper tools for the nf-core community. https://nf-co.re/tools
Data Science
Languages & Frameworks
nfcore/anndatar

5.9K

0

By nfcore

Updated 3 months ago
nfcore/eager

10K+

1

By nfcore

Updated 8 months ago
A Docker image for the nf-core/eager pipeline.
nfcore/pangenome

2.5K

0

By nfcore

Updated 2 years ago
All necessary dependencies for the nf-core/pangenome pipeline. See https://nf-co.re/pangenome.
Data Science
Machine Learning & AI
nfcore/dualrnaseq

2.8K

1

By nfcore

Updated 2 years ago
Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions.
Data Science
Machine Learning & AI
nfcore/sentieon

10K+

0

By nfcore

Updated 2 years ago
Docker containers to run licensed Sentieon software: www.sentieon.com
Data Science
Machine Learning & AI
nfcore/bcl2fastq

2.2K

0

By nfcore

Updated 2 years ago
nfcore/universc

767

0

By nfcore

Updated 2 years ago
Mirror of container for UniverSC: a flexible cross-platform SC data processing pipeline 
Data Science
Machine Learning & AI
nfcore/cellranger_clean

21

0

By nfcore

Updated 2 years ago
Mirror of universc Single cell tooling - cellranger_clean
Data Science
Machine Learning & AI
nfcore/vep

10K+

0

By nfcore

Updated 2 years ago
VEP images for nf-core pipelines
Data Science
Machine Learning & AI
nfcore/snpeff

10K+

1

By nfcore

Updated 2 years ago
snpEff images for nf-core pipelines
Data Science
Machine Learning & AI
nfcore/coproid

2.0K

0

By nfcore

Updated 2 years ago
A Docker image for the nf-core/coproid pipeline.
Data Science
Machine Learning & AI
nfcore/circrna

1.3K

0

By nfcore

Updated 2 years ago
Workflow for analysis and miRNA target prediction analysis of circRNAs in RNA-Seq data.
Data Science
Machine Learning & AI
nfcore/bclconvert

10K+

0

By nfcore

Updated 2 years ago
illumina bcl-convert. This is not an official image supported by illumina.
Data Science
Machine Learning & AI
nfcore/sareksnpeff

10K+

1

By nfcore

Updated 3 years ago
A Docker container for the nf-core/sarek pipeline
Data Science
Integration & Delivery
Machine Learning & AI
nfcore/sarekvep

10K+

1

By nfcore

Updated 3 years ago
A Docker container for the nf-core/sarek pipeline
Data Science
Machine Learning & AI