pwighton

CentileBrain normative models https://github.com/pwighton/fs-centilebrain

FreeSurfer docker containers built using neurodocker.

Custom slice prescription for Siemens MR scanners. https://github.com/pwighton/auto-register/

Tools for debugging socket communication

https://github.com/mathesong/bloodstream

FreeSurfer's infant pipeline. See https://surfer.nmr.mgh.harvard.edu/fswiki/infantFS-containers

FreeSurfer via neurodocker with continuumio/miniconda3 as the base container

My fork of neurodocker https://github.com/ReproNim/neurodocker

https://github.com/gablab/murfi2

A container for building samseg atlases

Container to run https://github.com/openneuropet/petpipeline

A collection of tools for creating BIDS datasets in one container

https://github.com/pwighton/fs-docker/blob/20201112-baby/20201106-fs-baby-ci.md

Container to run FreeSurfer binaries

FreeSurfer's FreeView in a browser

ChRIS plugin to run the FreeSurfer 6.0 recon-all stream