Sage Bionetworks

An R interface to Synapse, a collaborative workspace for reproducible disease research.

Main GENIE release utilities

Docker image for running scripts in https://github.com/Sage-Bionetworks/sysbioDCCjsonschemas.

Validation and Processing of GENIE

Python package for performing quality control (QC) for data coordination (DC)

Utilities for managing Sage Bionetworks challenges (including DREAM Challenges).

Client for ki rally management.

A place for Agora's ETL and Data Testing

Development container for Sage monorepo

https://github.com/Sage-Bionetworks/sage-monorepo

VS Code dev container used to develop the challenge ecosystem

Dev container for Schematic