vandhanak

STAR and STARlong aligners for RNA-seq data. Also has samtools 1.10 built in (htslib included).

r-base3.3.2, r-base-dev3.3.2, r-base-core3.3.2, r-recommended3.3.2 installed.

Bcftools1.3.1 with polygamy option enabled. Compiled with htslib 1.3.2 so has tabix and bgzip

Docker image for picard 2.6.0, java 1.8.0_102 is also included

Samtools-1.3.1 with htslib1.3 options enabled which includes bgzip, tabix