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bwa
By alexcoppe
Dockerized bwa
1.8K
Docker Pull Command:
docker pull alexcoppe/bwa
Example (bwa mem for paired-end Illumina reads):
docker run --rm -it -v ~/reference:/reference -v $(pwd):/data alexcoppe/bwa mem -M -t 8 reference/reference /data/1.fastq /data/2.fastq > mapping.sam
Content type
Image
Digest
Size
4.1 MB
Last updated
over 6 years ago