Commet - Comparing and combining multiple metagenomic datasets - Colib'read tool
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###Commet description: COMMET (“COmpare Multiple METagenomes”) provides a global similarity overview between all datasets of a large metagenomic project.
Directly from non-assembled reads, all against all comparisons are performed through an efficient indexing strategy. Then, results are stored as bit vectors, a compressed representation of read files, that can be used to further combine read subsets by common logical operations. Finally, COMMET computes a clusterization of metagenomic datasets, which is visualized by dendrogram and heatmaps.
###Commet website: https://colibread.inria.fr/software/commet/
###Commet Docker Github: https://github.com/cmonjeau/docker-commet
###Run Commet with docker: docker run -it --rm cmonjeau/commet
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Image
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sha256:9758d5dec…
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-
Last updated
about 11 years ago
docker pull cmonjeau/commet