Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
1.0K
This docker is a fork of the original docker : https://hub.docker.com/r/lpryszcz/redundans/ with some modifications in order to execute redundans as no root user.
Example command line:
docker run -it -w /srv/redundans cmonjeau/redundans ./redundans.py -v -i test/{600,5000}_{1,2}.fq.gz -f test/contigs.fa -o test/run1
Content type
Image
Digest
Size
155 MB
Last updated
almost 10 years ago
docker pull cmonjeau/redundans