dnalinux/samtools repository overview

Samtools is a set of utilities that manipulate alignments in the SAM (Sequence Alignment/Map), BAM, and CRAM formats. It converts between the formats, does sorting, merging and indexing, and can retrieve reads in any regions swiftly.

Source: https://www.htslib.org/doc/samtools.html⁠

Dockerfile available at: https://github.com/DNALinux/containers/tree/master/samtools⁠