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gregorysprenger/mlst

By gregorysprenger

Updated over 3 years ago

Image
0

1.3K

gregorysprenger/mlst repository overview

MLST

This image implements:

and the Dockerfiles can be found on github.

Example analysis:

Get test data:

mkdir -p data
cd data

# Download test data
wget -nv https://github.com/nf-core/test-datasets/raw/bactmap/genome/NCTC13799.fna

Run MLST:

mlst NCTC13799.fna > mlst-results.tsv

Tag summary

Content type

Image

Digest

sha256:69c8c8027

Size

314.3 MB

Last updated

over 3 years ago

docker pull gregorysprenger/mlst:v2.23.0