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kundajelab/coessentiality-browser

By kundajelab

•Updated over 6 years ago

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kundajelab/coessentiality-browser repository overview

⁠coessentiality-browser

Gene browser using coessentiality and related data. From the paper:

A genome-wide almanac of co-essential modules assigns function to uncharacterized genes. (https://www.biorxiv.org/content/10.1101/827071v1⁠)

⁠Installation/dependencies

In a conda environment, run: pip install -r requirements.txt.

The main requirement is Dash (https://github.com/plotly/dash/⁠), a framework for building the interactive interface.

⁠Launching interactive browser

From the conda environment, run python app.py

Tag summary

Content type

Image

Digest

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2 GB

Last updated

over 6 years ago

docker pull kundajelab/coessentiality-browser