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malab/mirlocator

By malab

Updated over 5 years ago

Machine learning-based mature miRNAs within pre-miRNA sequences

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malab/mirlocator repository overview

miRLocator applies machine learning algorithms to accurately predict the localization of most likely miRNAs within their pre-miRNAs.

One major strength of miRLocator is the fact that the machine learning-based miRNA prediction model can be automatically trained using user-given miRNAs, with informative features extracted from miRNA-miRNA* duplex and the optimized ratio between positive and negative samples.

The miRLocator python scripts and dependent libraries have been packaged into this docker image.

For comments/suggestions/error reports, please contact: [email protected]

Tag summary

Content type

Image

Digest

Size

503.3 MB

Last updated

over 5 years ago

docker pull malab/mirlocator