Malab

an end-to-end Galaxy platform enables reference genome-free m⁶A profiling using ONT DRS data.

an efficient and flexible bioinformatics platform for graph pangenome-based RNA-seq data analysis

A user-friendly database for efficient m6A-related regulatory network mining.

a user-friendly and multi-functionality platform for reference genome-free m6A-Seq data analysis

prediction of transcription factor binding using deep multi-task and transfer learning

PEA-m6A: an ensemble learning-based framework for predicting m6A modifications in plants

PEA-m6A: an ensemble learning-based framework for predicting m6A modifications in plants

A containerized web server for matrix factorization-based transcriptome analysis

Machine learning-based mature miRNAs within pre-miRNA sequences

iwa-miRNA is a web-based platform for interactive annotation of plant miRNAs

A containerized web server for interactive analysis of epitranscriptome sequencing data

CAFU: A Galaxy framework for exploring unmapped RNA-Seq data

An integrated R toolkit for plant epitranscriptome analysis

TAMF: a flexible framework for large-scale transcriptomic data analysis using matrix factorization

A deep learning-based R toolkit for genomic selection

A deep learning-based R toolkit for genomic selection