A container with the tools for doing single cell RNA-seq.
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This is a container for analyzing data from single cell RNA-seq experiments. It contains the following programs:
samtools bam-readcount STAR fastqc picard kallisto Sortmerna trimmomatic samstat HTSeq BackSPIN scRNA-Seq-TCC-prep Scripts R and various R packages used for single cell RNA-seq
Content type
Image
Digest
Size
2.4 GB
Last updated
almost 10 years ago
docker pull pici/scrnaseq