Parker Institute for Cancer Immunotherapy

Docker image with code to run a simple kallisto pipeline.

Docker image with the Tcr Receptor Utilities for Solid Tissue (TRUST) Python utility.

A container for atacseq, great, and homer

The preprocessing of exome sequence data - going from fastqs to fully processed bam files.

Parker Institute for Cancer Immunotherapy's (PICI) container for somatic variant identification.

A container with the tools for doing single cell RNA-seq.

The necessary tools for doing differential gene expression analysis on bulk rna-seq data.