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shaleklab/seurat

By shaleklab

•Updated over 7 years ago

Basic install of Seurat. Good for scripts and command line usage.

Image
0

67

shaleklab/seurat repository overview

basic install of seurat. good for scripts and command line usage. Tags follow version of seurat installed

Includes /usr/bin/python3 with anndata, deepdish, to assist with h5 and h5ad files, and UMAP-learn

SoupX is also installed, for 10X ambient rna noise reduction

Tag summary

Content type

Image

Digest

Size

863.6 MB

Last updated

over 7 years ago

docker pull shaleklab/seurat:3.0