Open-source GIS + AI (MCP) environmental monitoring & control for farms, greenhouses, IoT
28d
2.6K
SeqKit - a cross-platform and ultrafast toolkit for FASTA/Q file manipulation
1y
50K+
Sample docker container from a set of template files.
3y
10K+
A seqtk-style toolkit for sequence analysis.
6y
10K+
DuctApe: A suite for the analysis and correlation of genomic and OmniLog™ Phenotype Microarray data
6y
10K+
BCFtools is a program for variant calling and manipulating VCF and BCF files.
2y
10K+
Trimmomatic is a sequence read trimming tool for Illumina technology.
3y
10K+
1
Picard is a set of command line tools for manipulating high-throughput sequencing data.
4y
10K+
tassel 3 with modified enzymes to use the uneak pipeline.
4y
10K+
SAMtools is a set of utilities for interacting with and post-processing DNA sequence read alignments
1y
10K+
R tools for Population Genetics Tutorial by Grünwald et al
1y
10K+
Poppr: R package for analysis of populations with mixed modes of sexual and clonal reproduction.
1y
10K+
Stacks is a software pipeline for building loci from short-read sequences.
1y
10K+
LEA: An R package for landscape and ecological association studies
1y
10K+
A tool for species tree - gene tree inference and reconciliation.
1y
10K+
hierfstat: Estimation and Tests of Hierarchical F-Statistics
1y
10K+
A simple and efficient software to perform PCA and Clustering analysis For population VCF File.
11m
10K+
Trait Analysis by aSSociation, Evolution and Linkage
16h
10K+
Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing.
1y
10K+
2
Fast, efficient sequence read demultiplexer. It supports in-line combinatorial bar codes.
7y
10K+
Identifies candidate loci under natural selection from genetic data.
7y
10K+
GBS SNP Calling Reference Optional Pipeline
6y
10K+