SING Group

myBrain-Seq: a Compi pipeline for miRNA-Seq data analysis in neuropsychiatry

A compi RNA-Seq pipeline to perform differential expression.

A simple sklearn-based utility to perform PCA.

Differential Expression Workflow Executor (for RNA-Seq)

A Jupyter image with Python Scikit library installed.

Base images for PolyDeep MxNet pipelines

A minimal Jupyter notebook with TensorFlow and Matplotlib

Automated build for SEDA's bedtools plugin

BLAST DataBase Manager

Docker image with R, libraries, and data files required by the DREIMT application (www.dreimt.org).

Bisulfite-based methylcytosine caller

An R image with some machine learning libraries installed.

Automated build for SEDA's SAPP plugin

Metatax: a pipeline for the analysis of metataxonomics data based on 16s rRNA marker NGS

Automated build for SEDA's EMBOSS plugin

R docker image to run the examples of the book chapter in Statistics, Data Mining and Modeling

Automated build for SEDA's Splign-Compart plugin

Docker image with R and the libraries required by the DREIMT application.

Automated builds for SEDA's ProSplign-ProCompart plugin

SEDA BLAST

Automated build for SEDA's Clustal Omega plugin

Container with the BLAST tools required by the EvoPPI application