Snyder Bioinformatics Hub
Displaying 1 to 8 of 8 repositories
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Containerized 16S rRNA amplicon sequencing workflow using DADA2 and visualization tools.
1m
529
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Containerized bulk RNA-seq workflow using STAR and Salmon for alignment and quantification.
3m
271
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Shiny app Docker demo for sotk2, an R toolkit for integrative multi-omics analysis
5m
545
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Containerized NanoString GeoMx DSP pipeline: preprocessing, QC, normalization, and visualization.
7m
862
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Containerized NanoString GeoMx DSP pipeline: preprocessing, QC, normalization, and visualization.
7m
851
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Containerized 10x Genomics Xenium In Situ pipeline: QC, normalization, analysis, and visualization.
7m
903
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Containerized 10x Genomics Xenium In Situ pipeline: QC, normalization, analysis, and visualization.
7m
947