Filter by
(1)
Tools (written in C using htslib) for manipulating next-generation sequencing data
3m
1M+
5
Tools for manipulating next-generation sequencing data
7y
500K+
13
SAMtools is a set of utilities for interacting with and post-processing DNA sequence read alignments
1y
10K+
Docker image for the use of Samtools in Fred Hutch OCDO's WILDS
22d
10K+
Image containing samtools, for use in cwl workflows
3y
1M+
6
samtools docker demo
8y
10K+
samtools + varscan together for ease of use in workflows
3y
100K+
Image containing Java, Picard, bwa, samblaster, and samtools
4y
100K+
Image containing varscan and samtools, supporting a cwl helper script
8y
10K+
tabix entrypoint to samtools: http://www.htslib.org/doc/tabix.html
10y
3.2K
Docker with handy genome sequence tools. Included: samtools, seqtk. Contact: ebelter
9m
3.8K
Apply samtools addreplacerg to add a new read group and assign all reads to it in a BAM file
9y
10K+
Docker image for VarScan variant caller with SAMtools and bcftools dependencies
1y
870